EpiGraphDB is an analytical platform and database to support data mining in epidemiology. The platform incorporates a graph of causal estimates generated by systematically applying Mendelian randomization to a wide array of phenotypes, and augments this with a wealth of additional data from other bioinformatic sources. EpiGraphDB aims to support appropriate application and interpretation of causal inference in systematic automated analyses of many phenotypes.

epigraphdb is an R package to provide ease of access to EpiGraphDB services. We will refer to epigraphdb as the name of the R package whereas "EpiGraphDB" as the overall platform.

Installation

devtools is required to install from github:

NOTE: while the package repository is “epigraphdb-r”, the R package name is “epigraphdb”.

EpiGraphDB resources

link screenshot
docs docs
API api
web application webapp
r package epigraphdb-r