Generate Output Report — generate_report • metaboprep

This function writes an output report

Usage

generate_report(
  metaboprep,
  output_dir,
  output_filename = NULL,
  project = "Project",
  format = "pdf",
  template = "qc_report"
)

Arguments

metaboprep: an object of class Metaboprep
output_dir: character, the directory to save to
output_filename: character, default NULL i.e. create from input object
project: character, name for the current project
format: character, write either 'html' or 'pdf' report
template: character, type of report to output only current option is "qc_report"