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Harmonise LD matrix against summary data

Source: R/other_formats.R
harmonise_ld_dat.Rd

LD matrix returns with rsid_ea_oa identifiers. Make sure that they are oriented to the same effect allele as the summary dataset. Summary dataset can be exposure dataset or harmonised dartaset.

Usage

harmonise_ld_dat(x, ld)

Arguments

x

Exposure dataset or harmonised dataset

ld

Output from ld_matrix()

Value

List of exposure dataset and harmonised LD matrix