Generate MR report — mr_report • TwoSampleMR

Using the output from the mr() function this report will generate a report containing tables and graphs summarising the results. A separate report is produced for each exposure - outcome pair that was analysed.

Usage

mr_report(
  dat,
  output_path = ".",
  output_type = "html",
  author = "Analyst",
  study = "Two Sample MR",
  path = system.file("reports", package = "TwoSampleMR"),
  ...
)

Arguments

dat: Output from harmonise_data()
output_path: Directory in which reports should be saved.
output_type: Choose "html" or "md". Default is "html". All output files including cache and figures will appear in the folder specified in output_path.
author: Author name.
study: Study title.
path: The filepath to the report template.
...: Extra options to be passed to knitr::knit().