Query chrompos from vcf object

Source: R/query.r

Query chrompos from vcf object

query_chrompos_vcf(chrompos, vcf, id = NULL)

Arguments

chrompos

Either vector of chromosome and position ranges e.g. "1:1000" or "1:1000-2000", or data frame with columns chrom, start, end.

vcf

VCF object (e.g. from readVcf)

id

If multiple GWAS datasets in the vcf file, the name (sample ID) from which to perform the filter

Value

VCF object