Query chromosome and position using bcftools
query_chrompos_bcftools(chrompos, vcffile, id = NULL)Either vector of chromosome and position ranges e.g. "1:1000" or "1:1000-2000", or data frame with columns chrom, start, end.
Path to .vcf.gz GWAS summary data file
If multiple GWAS datasets in the vcf file, the name (sample ID) from which to perform the filter
vcf object