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Create GWAS vcf

Source: R/manipulate.r
create_vcf.Rd

Create GWAS vcf

Usage

create_vcf(
  chrom,
  pos,
  nea,
  ea,
  snp = NULL,
  ea_af = NULL,
  effect = NULL,
  se = NULL,
  pval = NULL,
  n = NULL,
  ncase = NULL,
  name = NULL
)

Arguments

chrom

chrom vector

pos

pos vector

nea

nea vector

ea

ea vector

snp

Optional vector

ea_af

Optional vector

effect

Optional vector

se

Optional vector

pval

Optional vector

n

Optional vector

ncase

Optional vector

name

Optional vector

Value

vcf object