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modified from ieugwasr::ld_matrix_local () Get LD matrix using local plink binary and reference dataset

Source: R/harmonise_ld.R
ld_matrix_local.Rd

modified from ieugwasr::ld_matrix_local () Get LD matrix using local plink binary and reference dataset

Usage

ld_matrix_local(variants, bfile, plink_bin)

Arguments

variants

List of variants (in plink 'set range' format).

bfile

Path to bed/bim/fam ld reference panel

plink_bin

Specify path to plink binary. Default = NULL.

Value

data frame